Wylensek D, Hitch T.C.A, et al. A collection of bacterial isolates from the pig intestine reveals functional and taxonomic diversity. Nat Commun 2020;in press:1–26.
Hitch T.C.A, Riedel T, Oren A, Overmann J, Lawley T.D, Clavel, T.Automated analysis of genomic sequences facilitates high-throughput and comprehensive description of bacteria. ISME Commun;1. Epub ahead of print 2021. DOI: 10.1038/s43705-021-00017-z.
Hitch TCA, Clavel T. A proposed update for the classification and description of bacterial lipolytic enzymes. PeerJ;2019. 2019. DOI: 10.7717/peerj.7249.
Hitch T, Creevey C. Spherical: an iterative workflow for assembling metagenomic datasets. BMC Bioinformatics;19. Epub ahead of print 2018. DOI: 10.1101/067256.
Hitch T.C.A, Thomas B.J, Friedersdorff J.C.A, Ougham H, Creevey C.J. Deep sequence analysis reveals the ovine rumen as a reservoir of antibiotic resistance genes. Environ Pollut 2018;235:571–575.
Automated analysis of genomic sequences facilitates high-throughput and comprehensive description of bacteria
TCA Hitch, T Riedel, A Oren, J Overmann, TD Lawley, T Clavel
ISME Communications 1 (1), 1-16,2021
Early-Life Immune System Maturation in Chickens Using a Synthetic Community of Cultured Gut Bacteria
C Zenner, TCA Hitch, T Riedel, E Wortmann, S Tiede, EM Buhl, B Abt, ...
Msystems 6 (3), e01300-20,2021
Handling of spurious sequences affects the outcome of high-throughput 16S rRNA gene amplicon profiling
S Reitmeier, TCA Hitch, N Treichel, N Fikas, B Hausmann, AE Ramer-Tait, ...
ISME Communications 1 (1), 1-12,2021
MiMiC: a bioinformatic approach for generation of synthetic communities from metagenomes
N Kumar, TCA Hitch, D Haller, I Lagkouvardos, T Clavel
Sporofaciens musculi gen. nov., sp. nov., a novel bacterium isolated from the caecum of an obese mouse
TS Rasmussen, T Streidl, TCA Hitch, E Wortmann, P Deptula, ...
International Journal of Systematic and Evolutionary Microbiology 71 (3), 004673,2021
Recent advances in culture-based gut microbiome research
TCA Hitch, A Afrizal, T Riedel, A Kioukis, D Haller, I Lagkouvardos, ...
International Journal of Medical Microbiology, 151485,2021
Upregulation of Anti-Oxidative Stress Response Improves Metabolic Changes in L-Selectin-Deficient Mice but Does Not Prevent NAFLD Progression or Fecal Microbiota Shifts
S Eswaran, A Babbar, HK Drescher, TCA Hitch, T Clavel, M Muschaweck, ...
International journal of molecular sciences 22 (14), 7314,2021
A collection of bacterial isolates from the pig intestine reveals functional and taxonomic diversity
D Wylensek, TCA Hitch, T Riedel, A Afrizal, N Kumar, E Wortmann, T Liu, ...
Nature communications 11 (1), 1-26,2020
High microbiota reactivity of adult human intestinal IgA requires somatic mutations
J Kabbert, J Benckert, T Rollenske, TCA Hitch, T Clavel, V Cerovic, ...
Journal of Experimental Medicine 217 (11),2020
Rumen virus populations: technological advances enhancing current understanding
RA Gilbert, EM Townsend, KS Crew, TCA Hitch, JCA Friedersdorff, ...
Frontiers in microbiology 11, 450,2020
Diversity and function of microbial lipases within the mammalian gut
TCA Hitch, JM Masson, T Streidl, T Fischöder, L Elling, T Clavel
Sequence and cultivation study of Muribaculaceae reveals novel species, host preference, and functional potential of this yet undescribed family
I Lagkouvardos, TR Lesker, TCA Hitch, EJC Gálvez, N Smit, K Neuhaus, ...
Microbiome 7 (1), 1-15,2019
Comparative metagenomic and metatranscriptomic analyses reveal the breed effect on the rumen microbiome and its associations with feed efficiency in beef cattle
F Li, TCA Hitch, Y Chen, CJ Creevey
Microbiome 7 (1), 1-21,2019
The Compromised Mucosal Immune System of β7 Integrin-Deficient Mice Has Only Minor Effects on the Fecal Microbiota in Homeostasis
A Babbar, TCA Hitch, O Pabst, T Clavel, J Hübel, S Eswaran, N Wagner, ...
Frontiers in microbiology 10, 228,2019
A proposed update for the classification and description of bacterial lipolytic enzymes
TCA Hitch, T Clavel
PeerJ 7, e7249,2019
Metatranscriptomics reveals mycoviral populations in the ovine rumen
TCA Hitch, JE Edwards, RA Gilbert
FEMS microbiology letters 366 (13), fnz161,2019
TCA Hitch, T Clavel
Bergey's Manual of Systematics of Archaea and Bacteria2019
Spherical: an iterative workflow for assembling metagenomic datasets
TCA Hitch, CJ Creevey
BMC bioinformatics 19 (1), 1-8,2018
Meta-proteomics of rumen microbiota indicates niche compartmentalisation and functional dominance in a limited number of metabolic pathways between abundant bacteria
EH Hart, CJ Creevey, T Hitch, AH Kingston-Smith
Scientific reports 8 (1), 1-11,2018
Deep sequence analysis reveals the ovine rumen as a reservoir of antibiotic resistance genes
TCA Hitch, BJ Thomas, JCA Friedersdorff, H Ougham, CJ Creevey
Environmental Pollution 235, 571-575,2018